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Sample

Sample details

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Metadata

Site
Landfill Leachate
Date sampled
2021-12-20

qPCR results

Test Copy no. %
bacF (Total Bacteria 1) 428730 100.0%
thau1 (Thauera Group 1) 10307 2.4%
thau2 (Thauera Group 2) 6951 1.6%

Functional traits by genus

Name Rel. freq. % AOO NOB ANMX Denite SOB SRB PAO GAO NF Bulking FOA FIL C1s
Sum (rel. freq. %) — 0.1% 0.2% 0.0% 29.7% 0.5% 0.0% 0.4% 0.1% 11.1% 0.0% 1.9% 0.3%
Allorhizobium-Neorhizobium-Pararhizobium-Rhizobium 0.2% — — — — — — — — — — — —
Amaricoccus 0.4% — — — — — — — — — — — —
Aquamicrobium 0.7% — — — ✓ — — — — — — — —
Arcobacter 0.1% — — — ✓ — — — — — — — —
Bauldia 0.1% — — — — — — — — — — — —
Bdellovibrio 0.2% — — — — — — — — — — — —
Bryobacter 0.1% — — — — — — — — — — — —
CL500-3 0.2% — — — — — — — — — — — —
Ca_Alysiosphaera 0.2% — — — — — — — — — — ✓ —
Ca_Promineofilum 0.6% — — — — — — — — — — ✓ —
Christensenellaceae_R-7_group 0.1% — — — — — — — — — — — —
Chryseobacterium 0.1% — — — — — — — — — — ✓ —
Defluviicoccus 0.1% — — — — — — — ✓ — — ✓ —
Dokdonella 0.1% — — — ✓ — — ✓ — — — — —
Ferruginibacter 0.1% — — — — — — — — — — — —
Haliangium 0.1% — — — — — — — — — — — —
Hydrogenophaga 2.8% — — — ✓ — — — — — — — —
Hyphomicrobium 0.3% — — — ✓ ✓ — — — — — — ✓
Ilumatobacter 0.1% — — — — — — — — — — — —
JGI_0001001-H03 0.1% — — — — — — — — — — — —
Ketobacter 0.1% — — — — — — — — — — — —
Labrys 0.1% — — — — — — — — — — — —
Lautropia 12.1% — — — ✓ — — — — — — — —
Legionella 0.3% — — — — — — — — — — — —
Leptothrix 0.1% — — — ✓ — — — — — — ✓ —
Leucobacter 0.3% — — — — — — — — — — — —
Limnobacter 2.9% — — — — — — — — — — — —
Litorilinea 0.5% — — — — — — — — — — ✓ —
Mesorhizobium 2.0% — — — ✓ — — — — — — — —
Microbacterium 0.1% — — — — — — — — — — — —
Nitrosomonas 0.1% ✓ — — ✓ — — — — — — — —
Nitrospira 0.2% ± ✓ — — — — — — — — — —
Oikopleura 0.1% — — — — — — — — — — — —
Ottowia 0.2% — — — ✓ ✓ — — — — — — —
Pedomicrobium 0.9% — — — — — — — — — — — —
Persicitalea 0.1% — — — — — — — — — — — —
Planctomicrobium 0.2% — — — — — — — — — — — —
Pseudaminobacter 0.2% — — — — — — — — — — — —
Rheinheimera 0.1% — — — — — — — — — — — —
Rubellimicrobium 0.1% — — — — — — — — — — — —
Rubrivivax 0.1% — — — — — — — — — — — —
SM1A02 2.0% — — — — ± — — — — — — —
Shinella 0.1% — — — — — — — — ± — — —
Sphingobium 0.2% — — — — — — — — — — — —
Stenotrophobacter 0.3% — — — — — — — — — — — —
Tetrasphaera 0.3% — — — — — — ✓ — — — ✓ —
Thauera 11.1% — — — ✓ — — — — ✓ — — —
Thermomonas 0.1% — — — ✓ — — — — — — — —
midas_g_1097 0.1% — — — — — — — — — — — —
midas_g_11150 0.3% — — — — — — — — — — — —
midas_g_1166 0.1% — — — — — — — — — — — —
midas_g_1221 0.5% — — — — — — — — — — — —
midas_g_12378 0.6% — — — — — — — — — — — —
midas_g_1291 0.1% — — — — — — — — — — — —
midas_g_1328 0.2% — — — — — — — — — — — —
midas_g_13592 0.2% — — — — — — — — — — — —
midas_g_1667 0.1% — — — — — — — — — — — —
midas_g_16734 0.5% — — — — — — — — — — — —
midas_g_169 0.4% — — — — — — — — — — — —
midas_g_17586 0.3% — — — — — — — — — — — —
midas_g_1838 0.4% — — — — — — — — — — — —
midas_g_1919 0.3% — — — — — — — — — — — —
midas_g_19344 0.1% — — — — — — — — — — — —
midas_g_21052 0.3% — — — — — — — — — — — —
midas_g_21520 0.1% — — — — — — — — — — — —
midas_g_22009 0.1% — — — — — — — — — — — —
midas_g_2332 0.1% — — — — — — — — — — — —
midas_g_2582 0.1% — — — — — — — — — — — —
midas_g_26 0.1% — — — — — — — — — — — —
midas_g_27435 0.2% — — — — — — — — — — — —
midas_g_28177 0.3% — — — — — — — — — — — —
midas_g_29742 0.1% — — — — — — — — — — — —
midas_g_3043 0.5% — — — — — — — — — — — —
midas_g_34634 0.2% — — — — — — — — — — — —
midas_g_36791 0.1% — — — — — — — — — — — —
midas_g_3775 1.0% — — — — — — — — — — — —
midas_g_3776 0.1% — — — — — — — — — — — —
midas_g_39032 1.6% — — — — — — — — — — — —
midas_g_4042 0.1% — — — — — — — — — — — —
midas_g_42266 0.2% — — — — — — — — — — — —
midas_g_4307 0.1% — — — — — — — — — — — —
midas_g_4465 0.1% — — — — — — — — — — — —
midas_g_473 0.1% — — — — — — — — — — — —
midas_g_4907 0.1% — — — — — — — — — — — —
midas_g_49245 0.1% — — — — — — — — — — — —
midas_g_50073 0.7% — — — — — — — — — — — —
midas_g_5053 0.2% — — — — — — — — — — — —
midas_g_50580 0.1% — — — — — — — — — — — —
midas_g_5143 0.1% — — — — — — — — — — — —
midas_g_52225 0.1% — — — — — — — — — — — —
midas_g_547 0.1% — — — — — — — — — — — —
midas_g_5706 8.3% — — — — — — — — — — — —
midas_g_57174 0.1% — — — — — — — — — — — —
midas_g_5853 0.2% — — — — — — — — — — — —
midas_g_61117 0.1% — — — — — — — — — — — —
midas_g_653 0.1% — — — — — — — — — — — —
midas_g_81 0.1% — — — — — — — — — — — —
midas_g_882 0.1% — — — — — — — — — — — —
midas_g_9516 0.3% — — — — — — — — — — — —

Bacteria

Kingdom Phylum Class Order Family Genus Rel. freq. %
Bacteria — — — — — 0.4%
Bacteria Acidobacteriota Acidobacteriae Bryobacterales Bryobacteraceae Bryobacter 0.1%
Bacteria Acidobacteriota Acidobacteriae PAUC26f midas_f_59582 midas_g_61117 0.1%
Bacteria Acidobacteriota Acidobacteriae Paludibaculum midas_f_675 midas_g_42266 0.2%
Bacteria Acidobacteriota Blastocatellia Blastocatellales Blastocatellaceae — 0.2%
Bacteria Acidobacteriota Blastocatellia Blastocatellales Blastocatellaceae JGI_0001001-H03 0.1%
Bacteria Acidobacteriota Blastocatellia Blastocatellales Blastocatellaceae Stenotrophobacter 0.3%
Bacteria Acidobacteriota Vicinamibacteria Vicinamibacterales midas_f_352 midas_g_1291 0.1%
Bacteria Actinobacteriota Acidimicrobiia — — — 0.1%
Bacteria Actinobacteriota Acidimicrobiia IMCC26256 midas_f_2 — 0.1%
Bacteria Actinobacteriota Acidimicrobiia IMCC26256 midas_f_2 midas_g_4307 0.1%
Bacteria Actinobacteriota Acidimicrobiia IMCC26256 midas_f_2 midas_g_653 0.1%
Bacteria Actinobacteriota Acidimicrobiia Microtrichales Ilumatobacteraceae Ilumatobacter 0.1%
Bacteria Actinobacteriota Actinobacteria Corynebacteriales — — 0.2%
Bacteria Actinobacteriota Actinobacteria Micrococcales Intrasporangiaceae Tetrasphaera 0.3%
Bacteria Actinobacteriota Actinobacteria Micrococcales Microbacteriaceae — 0.1%
Bacteria Actinobacteriota Actinobacteria Micrococcales Microbacteriaceae Leucobacter 0.3%
Bacteria Actinobacteriota Actinobacteria Micrococcales Microbacteriaceae Microbacterium 0.1%
Bacteria Actinobacteriota Thermoleophilia Gaiellales midas_f_269 midas_g_473 0.1%
Bacteria Armatimonadota Fimbriimonadia Fimbriimonadales Fimbriimonadaceae — 0.3%
Bacteria Armatimonadota Fimbriimonadia Fimbriimonadales Fimbriimonadaceae midas_g_5143 0.1%
Bacteria Bacteroidota Bacteroidia — — — 0.1%
Bacteria Bacteroidota Bacteroidia Bacteroidales Prolixibacteraceae — 0.3%
Bacteria Bacteroidota Bacteroidia Chitinophagales — — 0.3%
Bacteria Bacteroidota Bacteroidia Chitinophagales Chitinophagaceae — 0.3%
Bacteria Bacteroidota Bacteroidia Chitinophagales Chitinophagaceae Ferruginibacter 0.1%
Bacteria Bacteroidota Bacteroidia Chitinophagales Saprospiraceae midas_g_1328 0.2%
Bacteria Bacteroidota Bacteroidia Chitinophagales Saprospiraceae midas_g_1838 0.4%
Bacteria Bacteroidota Bacteroidia Chitinophagales midas_f_108 midas_g_21052 0.3%
Bacteria Bacteroidota Bacteroidia Cytophagales Microscillaceae midas_g_5053 0.2%
Bacteria Bacteroidota Bacteroidia Cytophagales Spirosomaceae Persicitalea 0.1%
Bacteria Bacteroidota Bacteroidia Flavobacteriales Weeksellaceae Chryseobacterium 0.1%
Bacteria Bacteroidota Bacteroidia Sphingobacteriales — — 0.1%
Bacteria Bacteroidota Bacteroidia Sphingobacteriales NS11-12_marine_group — 0.2%
Bacteria Bdellovibrionota Bdellovibrionia Bdellovibrionales Bdellovibrionaceae — 0.3%
Bacteria Bdellovibrionota Bdellovibrionia Bdellovibrionales Bdellovibrionaceae Bdellovibrio 0.2%
Bacteria Bdellovibrionota Oligoflexia Oligoflexales Oligoflexaceae — 0.1%
Bacteria Campylobacterota Campylobacteria Campylobacterales Arcobacteraceae Arcobacter 0.1%
Bacteria Chloroflexi Anaerolineae Anaerolineales Anaerolineaceae — 0.2%
Bacteria Chloroflexi Anaerolineae Anaerolineales Anaerolineaceae midas_g_50073 0.7%
Bacteria Chloroflexi Anaerolineae Ardenticatenales Ardenticatenaceae midas_g_13592 0.2%
Bacteria Chloroflexi Anaerolineae Ardenticatenales Ca_Promineofilaceae — 0.1%
Bacteria Chloroflexi Anaerolineae Ardenticatenales Ca_Promineofilaceae Ca_Promineofilum 0.6%
Bacteria Chloroflexi Anaerolineae Ardenticatenales Ca_Promineofilaceae midas_g_16734 0.5%
Bacteria Chloroflexi Anaerolineae Caldilineales Caldilineaceae — 0.8%
Bacteria Chloroflexi Anaerolineae Caldilineales Caldilineaceae Litorilinea 0.5%
Bacteria Chloroflexi Anaerolineae Caldilineales Caldilineaceae midas_g_12378 0.6%
Bacteria Chloroflexi Anaerolineae Caldilineales Caldilineaceae midas_g_169 0.4%
Bacteria Chloroflexi Anaerolineae Caldilineales Caldilineaceae midas_g_2582 0.1%
Bacteria Chloroflexi Anaerolineae Caldilineales Caldilineaceae midas_g_3043 0.5%
Bacteria Chloroflexi Anaerolineae Caldilineales Caldilineaceae midas_g_4907 0.1%
Bacteria Chloroflexi Anaerolineae Caldilineales Caldilineaceae midas_g_57174 0.1%
Bacteria Chloroflexi Chloroflexia Thermomicrobiales AKYG1722 midas_g_882 0.1%
Bacteria Chloroflexi Chloroflexia Thermomicrobiales JG30-KF-CM45 midas_g_4042 0.1%
Bacteria Cyanobacteria Vampirivibrionia Vampirovibrionales midas_f_19238 — 0.1%
Bacteria Desulfobacterota Desulfuromonadia PB19 midas_f_1334 midas_g_49245 0.1%
Bacteria Firmicutes Bacilli — — — 0.3%
Bacteria Firmicutes Clostridia Christensenellales Christensenellaceae Christensenellaceae_R-7_group 0.1%
Bacteria Gemmatimonadota BD2-11_terrestrial_group midas_o_58609 midas_f_58609 — 0.1%
Bacteria Hydrogenedentes Hydrogenedentia Hydrogenedentiales Hydrogenedensaceae — 0.2%
Bacteria Hydrogenedentes Hydrogenedentia Hydrogenedentiales Hydrogenedensaceae midas_g_1166 0.1%
Bacteria Myxococcota Myxococcia Myxococcales Myxococcaceae midas_g_22009 0.1%
Bacteria Myxococcota Polyangia Haliangiales Haliangiaceae Haliangium 0.1%
Bacteria Myxococcota Polyangia Nannocystales Nannocystaceae — 0.1%
Bacteria Nitrospirota Nitrospiria Nitrospirales Nitrospiraceae Nitrospira 0.2%
Bacteria Patescibacteria Dojkabacteria midas_o_546 — — 2.1%
Bacteria Patescibacteria Dojkabacteria midas_o_546 midas_f_23848 midas_g_50580 0.1%
Bacteria Patescibacteria Gracilibacteria Ca_Peribacteria midas_f_6329 — 0.1%
Bacteria Patescibacteria Microgenomatia Ca_Pacebacteria midas_f_25564 — 0.6%
Bacteria Patescibacteria Saccharimonadia Saccharimonadales — — 0.1%
Bacteria Planctomycetota BD7-11 midas_o_17905 — — 0.3%
Bacteria Planctomycetota BD7-11 midas_o_17905 midas_f_64916 — 0.1%
Bacteria Planctomycetota Phycisphaerae Phycisphaerales Phycisphaeraceae — 2.2%
Bacteria Planctomycetota Phycisphaerae Phycisphaerales Phycisphaeraceae CL500-3 0.2%
Bacteria Planctomycetota Phycisphaerae Phycisphaerales Phycisphaeraceae SM1A02 2.0%
Bacteria Planctomycetota Phycisphaerae mle1-8 — — 0.2%
Bacteria Planctomycetota Phycisphaerae mle1-8 midas_f_1686 — 2.4%
Bacteria Planctomycetota Phycisphaerae mle1-8 midas_f_1686 midas_g_52225 0.1%
Bacteria Planctomycetota Planctomycetes Gemmatales Gemmataceae — 1.0%
Bacteria Planctomycetota Planctomycetes Gemmatales Gemmataceae midas_g_9516 0.3%
Bacteria Planctomycetota Planctomycetes Pirellulales Pirellulaceae — 0.9%
Bacteria Planctomycetota Planctomycetes Pirellulales Pirellulaceae midas_g_1097 0.1%
Bacteria Planctomycetota Planctomycetes Pirellulales Pirellulaceae midas_g_36791 0.1%
Bacteria Planctomycetota Planctomycetes Planctomycetales Rubinisphaeraceae Planctomicrobium 0.2%
Bacteria Planctomycetota Planctomycetes Planctomycetales Rubinisphaeraceae midas_g_1221 0.5%
Bacteria Planctomycetota Planctomycetes midas_o_1071 midas_f_1071 — 0.1%
Bacteria Planctomycetota Planctomycetes midas_o_1071 midas_f_1071 midas_g_29742 0.1%
Bacteria Planctomycetota Planctomycetes midas_o_1071 midas_f_1071 midas_g_39032 1.6%
Bacteria Proteobacteria — — — — 0.1%
Bacteria Proteobacteria Alphaproteobacteria — — — 0.7%
Bacteria Proteobacteria Alphaproteobacteria Acetobacterales — — 0.1%
Bacteria Proteobacteria Alphaproteobacteria Defluviicoccales Defluviicoccaceae Defluviicoccus 0.1%
Bacteria Proteobacteria Alphaproteobacteria Kiloniellales Fodinicurvataceae midas_g_34634 0.2%
Bacteria Proteobacteria Alphaproteobacteria Micavibrionales Micavibrionaceae — 0.1%
Bacteria Proteobacteria Alphaproteobacteria Rhizobiales — — 0.6%
Bacteria Proteobacteria Alphaproteobacteria Rhizobiales Amb-16S-1323 midas_g_27435 0.2%
Bacteria Proteobacteria Alphaproteobacteria Rhizobiales Hyphomicrobiaceae — 0.4%
Bacteria Proteobacteria Alphaproteobacteria Rhizobiales Hyphomicrobiaceae Hyphomicrobium 0.3%
Bacteria Proteobacteria Alphaproteobacteria Rhizobiales Hyphomicrobiaceae Pedomicrobium 0.9%
Bacteria Proteobacteria Alphaproteobacteria Rhizobiales Labraceae Labrys 0.1%
Bacteria Proteobacteria Alphaproteobacteria Rhizobiales Methyloligellaceae — 0.7%
Bacteria Proteobacteria Alphaproteobacteria Rhizobiales Methyloligellaceae midas_g_11150 0.3%
Bacteria Proteobacteria Alphaproteobacteria Rhizobiales Rhizobiaceae — 1.7%
Bacteria Proteobacteria Alphaproteobacteria Rhizobiales Rhizobiaceae Allorhizobium-Neorhizobium-Pararhizobium-Rhizobium 0.2%
Bacteria Proteobacteria Alphaproteobacteria Rhizobiales Rhizobiaceae Aquamicrobium 0.7%
Bacteria Proteobacteria Alphaproteobacteria Rhizobiales Rhizobiaceae Mesorhizobium 2.0%
Bacteria Proteobacteria Alphaproteobacteria Rhizobiales Rhizobiaceae Pseudaminobacter 0.2%
Bacteria Proteobacteria Alphaproteobacteria Rhizobiales Rhizobiaceae Shinella 0.1%
Bacteria Proteobacteria Alphaproteobacteria Rhizobiales Xanthobacteraceae — 0.4%
Bacteria Proteobacteria Alphaproteobacteria Rhizobiales Xanthobacteraceae midas_g_1919 0.3%
Bacteria Proteobacteria Alphaproteobacteria Rhizobiales Xanthobacteraceae midas_g_21520 0.1%
Bacteria Proteobacteria Alphaproteobacteria Rhodobacterales Rhodobacteraceae — 0.5%
Bacteria Proteobacteria Alphaproteobacteria Rhodobacterales Rhodobacteraceae Amaricoccus 0.4%
Bacteria Proteobacteria Alphaproteobacteria Rhodobacterales Rhodobacteraceae Bauldia 0.1%
Bacteria Proteobacteria Alphaproteobacteria Rhodobacterales Rhodobacteraceae Rubellimicrobium 0.1%
Bacteria Proteobacteria Alphaproteobacteria Sphingomonadales Sphingomonadaceae — 0.1%
Bacteria Proteobacteria Alphaproteobacteria Sphingomonadales Sphingomonadaceae Sphingobium 0.2%
Bacteria Proteobacteria Alphaproteobacteria Tistrellales Geminicoccaceae — 1.1%
Bacteria Proteobacteria Alphaproteobacteria Tistrellales Geminicoccaceae Ca_Alysiosphaera 0.2%
Bacteria Proteobacteria Alphaproteobacteria Tistrellales Geminicoccaceae midas_g_5706 8.3%
Bacteria Proteobacteria Alphaproteobacteria midas_o_24 midas_f_107 midas_g_2332 0.1%
Bacteria Proteobacteria Gammaproteobacteria — — — 0.4%
Bacteria Proteobacteria Gammaproteobacteria Burkholderiales — — 0.5%
Bacteria Proteobacteria Gammaproteobacteria Burkholderiales Alcaligenaceae — 0.1%
Bacteria Proteobacteria Gammaproteobacteria Burkholderiales Burkholderiaceae — 0.5%
Bacteria Proteobacteria Gammaproteobacteria Burkholderiales Burkholderiaceae Lautropia 12.1%
Bacteria Proteobacteria Gammaproteobacteria Burkholderiales Burkholderiaceae Limnobacter 2.9%
Bacteria Proteobacteria Gammaproteobacteria Burkholderiales Comamonadaceae — 0.7%
Bacteria Proteobacteria Gammaproteobacteria Burkholderiales Comamonadaceae Hydrogenophaga 2.8%
Bacteria Proteobacteria Gammaproteobacteria Burkholderiales Comamonadaceae Leptothrix 0.1%
Bacteria Proteobacteria Gammaproteobacteria Burkholderiales Comamonadaceae Ottowia 0.2%
Bacteria Proteobacteria Gammaproteobacteria Burkholderiales Comamonadaceae Rubrivivax 0.1%
Bacteria Proteobacteria Gammaproteobacteria Burkholderiales Comamonadaceae midas_g_81 0.1%
Bacteria Proteobacteria Gammaproteobacteria Burkholderiales Nitrosomonadaceae Nitrosomonas 0.1%
Bacteria Proteobacteria Gammaproteobacteria Burkholderiales Rhodocyclaceae — 0.2%
Bacteria Proteobacteria Gammaproteobacteria Burkholderiales Rhodocyclaceae Thauera 11.1%
Bacteria Proteobacteria Gammaproteobacteria Burkholderiales Rhodocyclaceae midas_g_26 0.1%
Bacteria Proteobacteria Gammaproteobacteria Burkholderiales TRA3-20 midas_g_1667 0.1%
Bacteria Proteobacteria Gammaproteobacteria Burkholderiales TRA3-20 midas_g_3776 0.1%
Bacteria Proteobacteria Gammaproteobacteria Ectothiorhodospirales Thioalkalispiraceae — 0.1%
Bacteria Proteobacteria Gammaproteobacteria Enterobacterales Alteromonadaceae Rheinheimera 0.1%
Bacteria Proteobacteria Gammaproteobacteria Legionellales Legionellaceae Legionella 0.3%
Bacteria Proteobacteria Gammaproteobacteria Pseudomonadales — — 0.1%
Bacteria Proteobacteria Gammaproteobacteria Pseudomonadales Alcanivoracaceae Ketobacter 0.1%
Bacteria Proteobacteria Gammaproteobacteria Run-SP154 midas_f_27 — 0.1%
Bacteria Proteobacteria Gammaproteobacteria Run-SP154 midas_f_27 midas_g_3775 1.0%
Bacteria Proteobacteria Gammaproteobacteria Run-SP154 midas_f_27 midas_g_5853 0.2%
Bacteria Proteobacteria Gammaproteobacteria Xanthomonadales — — 5.5%
Bacteria Proteobacteria Gammaproteobacteria Xanthomonadales Rhodanobacteraceae — 3.8%
Bacteria Proteobacteria Gammaproteobacteria Xanthomonadales Rhodanobacteraceae Dokdonella 0.1%
Bacteria Proteobacteria Gammaproteobacteria Xanthomonadales Rhodanobacteraceae midas_g_19344 0.1%
Bacteria Proteobacteria Gammaproteobacteria Xanthomonadales Xanthomonadaceae — 0.1%
Bacteria Proteobacteria Gammaproteobacteria Xanthomonadales Xanthomonadaceae Thermomonas 0.1%
Bacteria Sumerlaeota Sumerlaeia midas_o_3047 midas_f_4465 midas_g_4465 0.1%
Bacteria Verrucomicrobiota Kiritimatiellae WCHB1-41 midas_f_28177 midas_g_28177 0.3%
Bacteria Verrucomicrobiota Verrucomicrobiae Pedosphaerales Pedosphaeraceae Oikopleura 0.1%
Bacteria WPS-2 midas_c_206 midas_o_395 midas_f_547 — 0.1%
Bacteria WPS-2 midas_c_206 midas_o_395 midas_f_547 midas_g_17586 0.3%
Bacteria WPS-2 midas_c_206 midas_o_395 midas_f_547 midas_g_547 0.1%

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