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Sample
Sample details
Metadata
- Site
- Landfill Leachate
- Date sampled
- 2021-06-23
qPCR results
| Test | Copy no. | % |
|---|---|---|
| bacF (Total Bacteria 1) | 375588 | 100.0% |
| thau1 (Thauera Group 1) | 5974 | 1.6% |
| thau2 (Thauera Group 2) | 24816 | 6.6% |
Functional traits by genus
| Name | Rel. freq. % | AOO | NOB | ANMX | Denite | SOB | SRB | PAO | GAO | NF Bulking | FOA | FIL | C1s |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Sum (rel. freq. %) | — | 0.1% | 0.3% | 0.0% | 29.1% | 0.9% | 0.0% | 0.5% | 0.0% | 21.4% | 0.0% | 1.9% | 0.7% |
| Amaricoccus | 0.5% | — | — | — | — | — | — | — | — | — | — | — | — |
| Aquamicrobium | 2.1% | — | — | — | ✓ | — | — | — | — | — | — | — | — |
| Azoarcus | 3.6% | — | — | — | ✓ | — | — | — | — | ✓ | — | — | — |
| Bdellovibrio | 0.3% | — | — | — | — | — | — | — | — | — | — | — | — |
| Bryobacter | 0.1% | — | — | — | — | — | — | — | — | — | — | — | — |
| Ca_Odyssella | 0.6% | — | — | — | — | — | — | — | — | — | — | — | — |
| Ca_Promineofilum | 1.2% | — | — | — | — | — | — | — | — | — | — | ✓ | — |
| Denitromonas | 0.5% | — | — | — | ✓ | — | — | — | — | — | — | — | — |
| Eubacterium | 0.1% | — | — | — | — | — | — | — | — | — | — | — | — |
| Francisella | 0.1% | — | — | — | — | — | — | — | — | — | — | — | — |
| Galbitalea | 0.1% | — | — | — | — | — | — | — | — | — | — | — | — |
| Hydrogenophaga | 0.5% | — | — | — | ✓ | — | — | — | — | — | — | — | — |
| Hyphomicrobium | 0.7% | — | — | — | ✓ | ✓ | — | — | — | — | — | — | ✓ |
| JTB255_marine_benthic_group | 0.6% | — | — | — | — | — | — | — | — | — | — | — | — |
| Lautropia | 0.3% | — | — | — | ✓ | — | — | — | — | — | — | — | — |
| Legionella | 0.5% | — | — | — | — | — | — | — | — | — | — | — | — |
| Leucobacter | 0.2% | — | — | — | — | — | — | — | — | — | — | — | — |
| Limnobacter | 9.3% | — | — | — | — | — | — | — | — | — | — | — | — |
| Litorilinea | 0.1% | — | — | — | — | — | — | — | — | — | — | ✓ | — |
| Mesorhizobium | 2.9% | — | — | — | ✓ | — | — | — | — | — | — | — | — |
| Nitrosomonas | 0.1% | ✓ | — | — | ✓ | — | — | — | — | — | — | — | — |
| Nitrospira | 0.3% | ± | ✓ | — | — | — | — | — | — | — | — | — | — |
| Ottowia | 0.2% | — | — | — | ✓ | ✓ | — | — | — | — | — | — | — |
| Paenibacillus | 0.2% | — | — | — | — | — | — | — | — | — | — | — | — |
| Pedomicrobium | 1.1% | — | — | — | — | — | — | — | — | — | — | — | — |
| Portibacter | 0.1% | — | — | — | — | — | — | — | — | — | — | — | — |
| Pseudaminobacter | 0.3% | — | — | — | — | — | — | — | — | — | — | — | — |
| Pseudoclavibacter | 0.1% | — | — | — | — | — | — | — | — | — | — | — | — |
| Rheinheimera | 0.1% | — | — | — | — | — | — | — | — | — | — | — | — |
| Rhodobacter | 0.4% | — | — | — | ✓ | — | — | — | — | — | — | — | — |
| Rubellimicrobium | 0.1% | — | — | — | — | — | — | — | — | — | — | — | — |
| Rubrobacter | 0.4% | — | — | — | — | — | — | — | — | — | — | — | — |
| SM1A02 | 1.5% | — | — | — | — | ± | — | — | — | — | — | — | — |
| Shinella | 0.1% | — | — | — | — | — | — | — | — | ± | — | — | — |
| Sphingobium | 0.3% | — | — | — | — | — | — | — | — | — | — | — | — |
| Tetrasphaera | 0.5% | — | — | — | — | — | — | ✓ | — | — | — | ✓ | — |
| Thauera | 17.7% | — | — | — | ✓ | — | — | — | — | ✓ | — | — | — |
| Trichococcus | 0.1% | — | — | — | — | — | — | — | — | — | — | ✓ | — |
| Truepera | 1.9% | — | — | — | — | — | — | — | — | — | — | — | — |
| Vicingus | 0.6% | — | — | — | — | — | — | — | — | — | — | — | — |
| Zoogloea | 0.1% | — | — | — | ✓ | — | — | — | — | ✓ | — | — | — |
| midas_g_11150 | 0.1% | — | — | — | — | — | — | — | — | — | — | — | — |
| midas_g_1212 | 0.1% | — | — | — | — | — | — | — | — | — | — | — | — |
| midas_g_12692 | 0.1% | — | — | — | — | — | — | — | — | — | — | — | — |
| midas_g_17586 | 0.2% | — | — | — | — | — | — | — | — | — | — | — | — |
| midas_g_184 | 0.1% | — | — | — | — | — | — | — | — | — | — | — | — |
| midas_g_1919 | 0.4% | — | — | — | — | — | — | — | — | — | — | — | — |
| midas_g_2178 | 0.1% | — | — | — | — | — | — | — | — | — | — | — | — |
| midas_g_2582 | 0.1% | — | — | — | — | — | — | — | — | — | — | — | — |
| midas_g_26 | 1.1% | — | — | — | — | — | — | — | — | — | — | — | — |
| midas_g_27435 | 0.1% | — | — | — | — | — | — | — | — | — | — | — | — |
| midas_g_2947 | 0.1% | — | — | — | — | — | — | — | — | — | — | — | — |
| midas_g_31560 | 0.2% | — | — | — | — | — | — | — | — | — | — | — | — |
| midas_g_34634 | 0.1% | — | — | — | — | — | — | — | — | — | — | — | — |
| midas_g_36898 | 0.4% | — | — | — | — | — | — | — | — | — | — | — | — |
| midas_g_39435 | 0.4% | — | — | — | — | — | — | — | — | — | — | — | — |
| midas_g_4688 | 0.1% | — | — | — | — | — | — | — | — | — | — | — | — |
| midas_g_50073 | 0.1% | — | — | — | — | — | — | — | — | — | — | — | — |
| midas_g_50227 | 0.1% | — | — | — | — | — | — | — | — | — | — | — | — |
| midas_g_52 | 0.1% | — | — | — | — | — | — | — | — | — | — | — | — |
| midas_g_5706 | 0.4% | — | — | — | — | — | — | — | — | — | — | — | — |
| midas_g_591 | 1.4% | — | — | — | — | — | — | — | — | — | — | — | — |
| midas_g_603 | 1.1% | — | — | — | — | — | — | — | — | — | — | — | — |
| midas_g_6621 | 0.2% | — | — | — | — | — | — | — | — | — | — | — | — |
| midas_g_81 | 1.5% | — | — | — | — | — | — | — | — | — | — | — | — |
| midas_g_83775 | 0.1% | — | — | — | — | — | — | — | — | — | — | — | — |
| midas_g_9719 | 0.4% | — | — | — | — | — | — | — | — | — | — | — | — |
| midas_g_991 | 0.1% | — | — | — | — | — | — | — | — | — | — | — | — |
Relative frequencies may not sum to 100% due to rounding and low-abundance filtering (< 0.10%). Filtered cumulative relative frequency: 4.32%.
Bacteria
| Kingdom | Phylum | Class | Order | Family | Genus | Rel. freq. % |
|---|---|---|---|---|---|---|
| Bacteria | — | — | — | — | — | 0.2% |
| Bacteria | Acidobacteriota | Acidobacteriae | Bryobacterales | Bryobacteraceae | Bryobacter | 0.1% |
| Bacteria | Acidobacteriota | Blastocatellia | Blastocatellales | Blastocatellaceae | — | 0.3% |
| Bacteria | Acidobacteriota | Vicinamibacteria | Vicinamibacterales | midas_f_352 | midas_g_991 | 0.1% |
| Bacteria | Actinobacteriota | — | — | — | — | 0.8% |
| Bacteria | Actinobacteriota | Acidimicrobiia | Actinomarinales | midas_f_591 | — | 0.1% |
| Bacteria | Actinobacteriota | Acidimicrobiia | Actinomarinales | midas_f_591 | midas_g_4688 | 0.1% |
| Bacteria | Actinobacteriota | Acidimicrobiia | Actinomarinales | midas_f_591 | midas_g_591 | 1.4% |
| Bacteria | Actinobacteriota | Acidimicrobiia | IMCC26256 | midas_f_2 | — | 0.1% |
| Bacteria | Actinobacteriota | Actinobacteria | Micrococcales | Intrasporangiaceae | Tetrasphaera | 0.5% |
| Bacteria | Actinobacteriota | Actinobacteria | Micrococcales | Microbacteriaceae | — | 0.2% |
| Bacteria | Actinobacteriota | Actinobacteria | Micrococcales | Microbacteriaceae | Galbitalea | 0.1% |
| Bacteria | Actinobacteriota | Actinobacteria | Micrococcales | Microbacteriaceae | Leucobacter | 0.2% |
| Bacteria | Actinobacteriota | Actinobacteria | Micrococcales | Microbacteriaceae | Pseudoclavibacter | 0.1% |
| Bacteria | Actinobacteriota | Rubrobacteria | Rubrobacterales | Rubrobacteriaceae | Rubrobacter | 0.4% |
| Bacteria | Actinobacteriota | Thermoleophilia | Solirubrobacterales | 67-14 | midas_g_52 | 0.1% |
| Bacteria | Armatimonadota | Fimbriimonadia | Fimbriimonadales | Fimbriimonadaceae | — | 0.1% |
| Bacteria | Bacteroidota | Bacteroidia | Bacteroidales | Prolixibacteraceae | — | 0.2% |
| Bacteria | Bacteroidota | Bacteroidia | Chitinophagales | Saprospiraceae | Portibacter | 0.1% |
| Bacteria | Bacteroidota | Bacteroidia | Cytophagales | Microscillaceae | — | 0.4% |
| Bacteria | Bacteroidota | Bacteroidia | Flavobacteriales | Cryomorphaceae | Vicingus | 0.6% |
| Bacteria | Bacteroidota | Bacteroidia | Sphingobacteriales | — | — | 0.3% |
| Bacteria | Bacteroidota | Bacteroidia | Sphingobacteriales | NS11-12_marine_group | — | 0.5% |
| Bacteria | Bacteroidota | Bacteroidia | Sphingobacteriales | NS11-12_marine_group | midas_g_50227 | 0.1% |
| Bacteria | Bdellovibrionota | Bdellovibrionia | Bacteriovoracales | Bacteriovoracaceae | — | 0.1% |
| Bacteria | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Bdellovibrionaceae | — | 0.4% |
| Bacteria | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Bdellovibrionaceae | Bdellovibrio | 0.3% |
| Bacteria | Bdellovibrionota | Oligoflexia | 0319-6G20 | midas_f_3092 | — | 0.1% |
| Bacteria | Bdellovibrionota | Oligoflexia | Oligoflexales | Oligoflexaceae | — | 0.1% |
| Bacteria | Chloroflexi | Anaerolineae | Anaerolineales | Anaerolineaceae | midas_g_50073 | 0.1% |
| Bacteria | Chloroflexi | Anaerolineae | Ardenticatenales | Ca_Promineofilaceae | Ca_Promineofilum | 1.2% |
| Bacteria | Chloroflexi | Anaerolineae | Ardenticatenales | midas_f_39435 | midas_g_39435 | 0.4% |
| Bacteria | Chloroflexi | Anaerolineae | Caldilineales | Caldilineaceae | — | 0.1% |
| Bacteria | Chloroflexi | Anaerolineae | Caldilineales | Caldilineaceae | Litorilinea | 0.1% |
| Bacteria | Chloroflexi | Anaerolineae | Caldilineales | Caldilineaceae | midas_g_2582 | 0.1% |
| Bacteria | Chloroflexi | Anaerolineae | SBR1031 | A4b | — | 0.2% |
| Bacteria | Chloroflexi | Anaerolineae | SBR1031 | midas_f_1469 | midas_g_2178 | 0.1% |
| Bacteria | Chloroflexi | Anaerolineae | SBR1031 | midas_f_184 | midas_g_184 | 0.1% |
| Bacteria | Chloroflexi | Chloroflexia | Thermomicrobiales | AKYG1722 | midas_g_1212 | 0.1% |
| Bacteria | Cyanobacteria | Sericytochromatia | midas_o_1421 | midas_f_1421 | — | 0.1% |
| Bacteria | Dadabacteria | Dadabacteriia | Dadabacteriales | midas_f_603 | midas_g_603 | 1.1% |
| Bacteria | Deinococcota | Deinococci | Deinococcales | Trueperaceae | Truepera | 1.9% |
| Bacteria | Firmicutes | — | — | — | — | 0.1% |
| Bacteria | Firmicutes | Bacilli | — | — | — | 1.4% |
| Bacteria | Firmicutes | Bacilli | Bacillales | — | — | 0.1% |
| Bacteria | Firmicutes | Bacilli | Lactobacillales | Carnobacteriaceae | Trichococcus | 0.1% |
| Bacteria | Firmicutes | Bacilli | Paenibacillales | Paenibacillaceae | Paenibacillus | 0.2% |
| Bacteria | Firmicutes | Clostridia | Eubacteriales | Eubacteriaceae | Eubacterium | 0.1% |
| Bacteria | Hydrogenedentes | Hydrogenedentia | Hydrogenedentiales | Hydrogenedensaceae | — | 0.3% |
| Bacteria | Hydrogenedentes | Hydrogenedentia | Hydrogenedentiales | Hydrogenedensaceae | midas_g_6621 | 0.2% |
| Bacteria | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | 0.3% |
| Bacteria | Patescibacteria | Saccharimonadia | Saccharimonadales | — | — | 0.2% |
| Bacteria | Planctomycetota | Phycisphaerae | Phycisphaerales | Phycisphaeraceae | — | 3.6% |
| Bacteria | Planctomycetota | Phycisphaerae | Phycisphaerales | Phycisphaeraceae | SM1A02 | 1.5% |
| Bacteria | Planctomycetota | Phycisphaerae | Phycisphaerales | Phycisphaeraceae | midas_g_36898 | 0.4% |
| Bacteria | Planctomycetota | Phycisphaerae | mle1-8 | midas_f_1686 | — | 0.1% |
| Bacteria | Planctomycetota | Planctomycetes | Pirellulales | Pirellulaceae | — | 0.3% |
| Bacteria | Proteobacteria | Alphaproteobacteria | — | — | — | 0.7% |
| Bacteria | Proteobacteria | Alphaproteobacteria | Kiloniellales | Fodinicurvataceae | midas_g_34634 | 0.1% |
| Bacteria | Proteobacteria | Alphaproteobacteria | Micavibrionales | Micavibrionaceae | — | 0.1% |
| Bacteria | Proteobacteria | Alphaproteobacteria | Micavibrionales | midas_f_25039 | midas_g_31560 | 0.2% |
| Bacteria | Proteobacteria | Alphaproteobacteria | Paracaedibacterales | Paracaedibacteraceae | — | 0.1% |
| Bacteria | Proteobacteria | Alphaproteobacteria | Paracaedibacterales | Paracaedibacteraceae | Ca_Odyssella | 0.6% |
| Bacteria | Proteobacteria | Alphaproteobacteria | Rhizobiales | — | — | 0.6% |
| Bacteria | Proteobacteria | Alphaproteobacteria | Rhizobiales | Amb-16S-1323 | midas_g_27435 | 0.1% |
| Bacteria | Proteobacteria | Alphaproteobacteria | Rhizobiales | Hyphomicrobiaceae | — | 0.9% |
| Bacteria | Proteobacteria | Alphaproteobacteria | Rhizobiales | Hyphomicrobiaceae | Hyphomicrobium | 0.7% |
| Bacteria | Proteobacteria | Alphaproteobacteria | Rhizobiales | Hyphomicrobiaceae | Pedomicrobium | 1.1% |
| Bacteria | Proteobacteria | Alphaproteobacteria | Rhizobiales | Methyloligellaceae | — | 0.2% |
| Bacteria | Proteobacteria | Alphaproteobacteria | Rhizobiales | Methyloligellaceae | midas_g_11150 | 0.1% |
| Bacteria | Proteobacteria | Alphaproteobacteria | Rhizobiales | Methyloligellaceae | midas_g_12692 | 0.1% |
| Bacteria | Proteobacteria | Alphaproteobacteria | Rhizobiales | Rhizobiaceae | — | 1.7% |
| Bacteria | Proteobacteria | Alphaproteobacteria | Rhizobiales | Rhizobiaceae | Aquamicrobium | 2.1% |
| Bacteria | Proteobacteria | Alphaproteobacteria | Rhizobiales | Rhizobiaceae | Mesorhizobium | 2.9% |
| Bacteria | Proteobacteria | Alphaproteobacteria | Rhizobiales | Rhizobiaceae | Pseudaminobacter | 0.3% |
| Bacteria | Proteobacteria | Alphaproteobacteria | Rhizobiales | Rhizobiaceae | Shinella | 0.1% |
| Bacteria | Proteobacteria | Alphaproteobacteria | Rhizobiales | Xanthobacteraceae | — | 0.1% |
| Bacteria | Proteobacteria | Alphaproteobacteria | Rhizobiales | Xanthobacteraceae | midas_g_1919 | 0.4% |
| Bacteria | Proteobacteria | Alphaproteobacteria | Rhodobacterales | Rhodobacteraceae | — | 0.5% |
| Bacteria | Proteobacteria | Alphaproteobacteria | Rhodobacterales | Rhodobacteraceae | Amaricoccus | 0.5% |
| Bacteria | Proteobacteria | Alphaproteobacteria | Rhodobacterales | Rhodobacteraceae | Rhodobacter | 0.4% |
| Bacteria | Proteobacteria | Alphaproteobacteria | Rhodobacterales | Rhodobacteraceae | Rubellimicrobium | 0.1% |
| Bacteria | Proteobacteria | Alphaproteobacteria | Rhodospirillales | midas_f_7641 | — | 0.1% |
| Bacteria | Proteobacteria | Alphaproteobacteria | Rhodospirillales | midas_f_7641 | midas_g_83775 | 0.1% |
| Bacteria | Proteobacteria | Alphaproteobacteria | Sphingomonadales | Sphingomonadaceae | Sphingobium | 0.3% |
| Bacteria | Proteobacteria | Alphaproteobacteria | Tistrellales | Geminicoccaceae | midas_g_5706 | 0.4% |
| Bacteria | Proteobacteria | Gammaproteobacteria | — | — | — | 0.3% |
| Bacteria | Proteobacteria | Gammaproteobacteria | Burkholderiales | — | — | 0.5% |
| Bacteria | Proteobacteria | Gammaproteobacteria | Burkholderiales | Alcaligenaceae | — | 0.1% |
| Bacteria | Proteobacteria | Gammaproteobacteria | Burkholderiales | Burkholderiaceae | — | 0.1% |
| Bacteria | Proteobacteria | Gammaproteobacteria | Burkholderiales | Burkholderiaceae | Lautropia | 0.3% |
| Bacteria | Proteobacteria | Gammaproteobacteria | Burkholderiales | Burkholderiaceae | Limnobacter | 9.3% |
| Bacteria | Proteobacteria | Gammaproteobacteria | Burkholderiales | Comamonadaceae | — | 0.7% |
| Bacteria | Proteobacteria | Gammaproteobacteria | Burkholderiales | Comamonadaceae | Hydrogenophaga | 0.5% |
| Bacteria | Proteobacteria | Gammaproteobacteria | Burkholderiales | Comamonadaceae | Ottowia | 0.2% |
| Bacteria | Proteobacteria | Gammaproteobacteria | Burkholderiales | Comamonadaceae | midas_g_81 | 1.5% |
| Bacteria | Proteobacteria | Gammaproteobacteria | Burkholderiales | Nitrosomonadaceae | — | 0.1% |
| Bacteria | Proteobacteria | Gammaproteobacteria | Burkholderiales | Nitrosomonadaceae | Nitrosomonas | 0.1% |
| Bacteria | Proteobacteria | Gammaproteobacteria | Burkholderiales | Rhodocyclaceae | — | 18.3% |
| Bacteria | Proteobacteria | Gammaproteobacteria | Burkholderiales | Rhodocyclaceae | Azoarcus | 3.6% |
| Bacteria | Proteobacteria | Gammaproteobacteria | Burkholderiales | Rhodocyclaceae | Denitromonas | 0.5% |
| Bacteria | Proteobacteria | Gammaproteobacteria | Burkholderiales | Rhodocyclaceae | Thauera | 17.7% |
| Bacteria | Proteobacteria | Gammaproteobacteria | Burkholderiales | Rhodocyclaceae | Zoogloea | 0.1% |
| Bacteria | Proteobacteria | Gammaproteobacteria | Burkholderiales | Rhodocyclaceae | midas_g_26 | 1.1% |
| Bacteria | Proteobacteria | Gammaproteobacteria | Burkholderiales | Rhodocyclaceae | midas_g_9719 | 0.4% |
| Bacteria | Proteobacteria | Gammaproteobacteria | Enterobacterales | Alteromonadaceae | Rheinheimera | 0.1% |
| Bacteria | Proteobacteria | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | — | 0.1% |
| Bacteria | Proteobacteria | Gammaproteobacteria | Francisellales | Francisellaceae | Francisella | 0.1% |
| Bacteria | Proteobacteria | Gammaproteobacteria | Legionellales | Legionellaceae | Legionella | 0.5% |
| Bacteria | Proteobacteria | Gammaproteobacteria | Steroidobacterales | Steroidobacteraceae | — | 0.1% |
| Bacteria | Proteobacteria | Gammaproteobacteria | Steroidobacterales | Woeseiaceae | JTB255_marine_benthic_group | 0.6% |
| Bacteria | Proteobacteria | Gammaproteobacteria | Xanthomonadales | Rhodanobacteraceae | — | 0.3% |
| Bacteria | Sumerlaeota | Sumerlaeia | Sumerlaeales | Sumerlaeaceae | — | 0.4% |
| Bacteria | Verrucomicrobiota | Verrucomicrobiae | Verrucomicrobiales | DEV007 | midas_g_2947 | 0.1% |
| Bacteria | WPS-2 | midas_c_206 | midas_o_395 | midas_f_547 | midas_g_17586 | 0.2% |
Relative frequencies may not sum to 100% due to rounding and low-abundance filtering (< 0.10%). Filtered cumulative relative frequency: 4.32%.